ASpdb: an integrative knowledgebase of human protein isoforms from experimental and AI-predicted structures
ASpdb Logo

Home

Download

Statistics

Examples

Help

Contact

Terms of Use

Center for Computational Systems Medicine
leaf

Protein Summary

leaf

AS Summary

leaf

Protein Functional Features

leaf

Gene Isoform Structures and Expression Levels

leaf

Protein Structures

leaf

pLDDT Score Distribution

leaf

Ramachandran Plot of Protein Structures

leaf

Potential Active Site Information

leaf

Protein Structure and Feature Comparision

leaf

Protein-Protein Interaction

leaf

Related Drugs

leaf

Related Diseases

leaf

Clinically Important Variants

Protein:DRD3

Protein Summary

check button Gene summary
Gene name: DRD3
ASpdb.0 ID: 1814
Gene
Gene symbol

DRD3

Gene ID

1814

Gene namedopamine receptor D3
SynonymsD3DR|ETM1|FET1
Cytomap

3q13.31

Type of geneprotein-coding
DescriptionD(3) dopamine receptoressential tremor 1
Modification date20240411
UniProtAcc

P35462


check button Gene ontology of this gene with evidence of Inferred from Direct Assay (IDA) from Entrez
PartnerGeneGO IDGO termPubMed ID
GeneDRD3

GO:0001591

dopamine neurotransmitter receptor activity, coupled via Gi/Go

8301582

GeneDRD3

GO:0002031

G protein-coupled receptor internalization

18424554

GeneDRD3

GO:0005886

plasma membrane

8413587|16386234|18424554|20531939

GeneDRD3

GO:0006874

intracellular calcium ion homeostasis

7911712

GeneDRD3

GO:0007186

G protein-coupled receptor signaling pathway

7911712

GeneDRD3

GO:0007191

adenylate cyclase-activating dopamine receptor signaling pathway

18424554

GeneDRD3

GO:0007195

adenylate cyclase-inhibiting dopamine receptor signaling pathway

7907363|8666994|18424554

GeneDRD3

GO:0034776

response to histamine

16839358

GeneDRD3

GO:0050482

arachidonic acid secretion

8301582

GeneDRD3

GO:0050709

negative regulation of protein secretion

16839358



AS Summary

check button Information of the canonical protein with experimentally identified structure from PDB (2023).
UniProt AccFile namePDB IDMethodResolutionChainStartEnd
P35462-1P35462-1_3pbl_A.pdb3PBLX-ray2.89A319400

check button ASpdb's canonical and alternatively spliced isoform information.
accession_idgene_namecanonical_idalternative_idcanonical_lengthalternative_lengthcanonical_startcanonical_endtypeoriginalSEQvariationSEQalternative_startalternative_end
P35462DRD3P35462-1P35462-3400367287320SubstitutionSPTIAPKLSLEVRKLSNGRLSTSLKLGPLQPRGVM287287

check buttonMultiple sequence alignment of our canonical and alternatively spliced DRD3

check button Matched gene isoform IDs with Ensembl and RefSeq of our canonical and alternative spliced genes of DRD3
UniProt-idENSGENSTENSP
P35462-1ENSG00000151577.14ENST00000383673.5ENSP00000373169.2
P35462-1ENSG00000151577.14ENST00000460779.5ENSP00000419402.1
P35462-1ENSG00000151577.14ENST00000467632.5ENSP00000420662.1
P35462-3ENSG00000151577.14ENST00000295881.9ENSP00000295881.6

UniProt-idNM IDNP ID
P35462-1NM_000796.5NP_000787.2
P35462-1NM_001282563.2NP_001269492.1
P35462-1NM_001290809.1NP_001277738.1
P35462-3NM_033663.5NP_387512.3

check buttonAmino acid sequences of our canonical and alternatively spliced DRD3
accession_idProtein sequence
P35462-1MASLSQLSSHLNYTCGAENSTGASQARPHAYYALSYCALILAIVFGNGLVCMAVLKERALQTTTNYLVVSLAVADLLVATLVMPWVVYLE
VTGGVWNFSRICCDVFVTLDVMMCTASILNLCAISIDRYTAVVMPVHYQHGTGQSSCRRVALMITAVWVLAFAVSCPLLFGFNTTGDPTV
CSISNPDFVIYSSVVSFYLPFGVTVLVYARIYVVLKQRRRKRILTRQNSQCNSVRPGFPQQTLSPDPAHLELKRYYSICQDTALGGPGFQ
ERGGELKREEKTRNSLSPTIAPKLSLEVRKLSNGRLSTSLKLGPLQPRGVPLREKKATQMVAIVLGAFIVCWLPFFLTHVLNTHCQTCHV
P35462-3MASLSQLSSHLNYTCGAENSTGASQARPHAYYALSYCALILAIVFGNGLVCMAVLKERALQTTTNYLVVSLAVADLLVATLVMPWVVYLE
VTGGVWNFSRICCDVFVTLDVMMCTASILNLCAISIDRYTAVVMPVHYQHGTGQSSCRRVALMITAVWVLAFAVSCPLLFGFNTTGDPTV
CSISNPDFVIYSSVVSFYLPFGVTVLVYARIYVVLKQRRRKRILTRQNSQCNSVRPGFPQQTLSPDPAHLELKRYYSICQDTALGGPGFQ
ERGGELKREEKTRNSLMPLREKKATQMVAIVLGAFIVCWLPFFLTHVLNTHCQTCHVSPELYSATTWLGYVNSALNPVIYTTFNIEFRKA

Protein Functional Features

check buttonMain function of this protein. (from UniProt)
DRD3 (go to UniProt):P35462

check buttonRetention analysis result of protein across 39 protein features of UniProt such as six molecule processing features, 13 region features, four site features, six amino acid modification features, two natural variation features, five experimental info features, and 3 secondary structure features. Here, because of limited space for viewing, we only show the protein feature retention information belong to the 13 regional features. All retention annotation result can be downloaded at

download page

* Minus value of BPloci means that the break pointn is located before the CDS.
- Retained protein feature among the 13 regional features.
Accession_idSubsectionStartEndFuncitonal featureSplicing information
P35462Topological domain210329Note=Cytoplasmic;Ontology_term=ECO:0000269;evidence=ECO:0000269|PubMed:21097933;Dbxref=PMID:21097933Type=Substitution;Start=287;End=320


Gene Isoform Structures and Expression Levels for DRD3

check buttonGene structures of our canonical and alternative spliced genes of DRD3
* Click on the image to open the UCSC genome browser with custom track showing this image in a new window.
gene isoform structure of DRD3

check button Expression levels of gene isoforms across GTEx.
gtex expression

check button Expression levels of gene isoforms across TCGA.
tcga expression


Protein Structures

check button PDB and CIF files of the predicted protein structures
* Here we show the 3D structure of the proteins using Mol*. AlphaFold produces a per-residue confidence score (pLDDT) between 0 and 100. Model confidence is shown from the pLDDT values per residue. pLDDT corresponds to the model’s prediction of its score on the local Distance Difference Test. It is a measure of local accuracy (from AlphfaFold website). To color code individual residues, we transformed individual PDB files into CIF format.
3D view using mol* of P35462-1
3D view using mol* of P35462-3


pLDDT Score Distribution

check button pLDDT score distribution of the predicted protein structures from AlphaFold2
* AlphaFold produces a per-residue confidence score (pLDDT) between 0 and 100.
pLDDT distribution across the protein length of P35462-1
all structure
pLDDT distribution across the protein length of P35462-3
all structure


Ramachandran Plot of Protein Structures


check button Ramachandran plot of the torsional angles - phi (φ)and psi (ψ) - of the residues (amino acids) contained in this protein peptide.
Ramachandran plot of P35462-1
all structure
Ramachandran plot of P35462-3
all structure

Potential Active Site Information


check button The potential binding sites of these proteins were identified using SiteMap, a module of the Schrodinger suite.
UniProt-idSite scoreSizeD scoreVolumeExposureEnclosureContactPhobicPhilicBalanceDon/AccResidues
P35462-11.1061631.141527.8770.4910.8071.010.7330.870.8422.17728,29,32,36,86,89,90,93,94,106,107,110,111,114,180
,181,182,183,189,192,193,196,342,345,346,349,352,3
53,360,362,363,365,366,369,372,373
P35462-31.1121771.152511.7560.4430.8051.0521.030.8321.2382.86829,32,33,36,86,89,90,91,93,94,106,107,110,111,114,
115,180,181,182,183,192,196,309,312,313,316,329,33
0,332,333,334,336,339,340

Protein Structure and Feature Comparision


check button Protein Structure Comparision Using Template Modeling Scores (TM-score).
all structure

check button Protein Structure Comparision Visualization with mol*. between Canonical predicted structure (AF2)(orange) vs Canonical validated structure (PDB)(green)
3D view using mol* of P35462-1_P35462-1_3pbl_A.pdb

check button Protein Structure Comparision Visualization with mol*. between Canonical validated structure (PDB)(orange) vs Alternative predicted structure (AF2)(green)
3D view using mol* of P35462-1_3pbl_A_P35462-3.pdb

check button Protein Structure Comparision Visualization with mol*. between Canonical predicted structure (AF2)(orange) vs Alternative predicted structure (AF2)(green)
3D view using mol* of P35462-1_P35462-3.pdb

check button Protein Feature Comparison of the protein sequendary structures among the protiens.
./stats/secondary_structure/figure/P35462-1_vs_P35462-3.png
all structure<

check button Protein Feature Comparison of the relative accessible surface area (ASA) among the protiens.
./stats/relative_asa/P35462-1_vs_P35462-3.png
all structure<


Protein-Protein Interaction


check button Interactors from UniProt.
Accession_idSubsectionStartEndFuncitonal featureSplicing information


check button Interactors from STRING.
Gene nameInteractors


Related Drugs to DRD3


check button Drugs targeting this gene/protein.
(DrugBank)
UniProt accessionGene nameDrugBank IDDrug nameDrug groupActions
P35462DRD3DB12478Piribedilinvestigational
P35462DRD3DB01186Pergolideapproved, investigational, vet_approved, withdrawnagonist
P35462DRD3DB01239Chlorprothixeneapproved, experimental, investigational, withdrawnantagonist
P35462DRD3DB01392Yohimbineapproved, investigational, vet_approvedantagonist
P35462DRD3DB00490Buspironeapproved, investigationalantagonist
P35462DRD3DB13025Tiaprideinvestigationalblocker
P35462DRD3DB01200Bromocriptineapproved, investigational, withdrawnagonist
P35462DRD3DB00413Pramipexoleapproved, investigationalagonist
P35462DRD3DB06288Amisulprideapproved, investigationalantagonist
P35462DRD3DB00543Amoxapineapprovedantagonist
P35462DRD3DB12061Pardoprunoxinvestigational
P35462DRD3DB01224Quetiapineapprovedligand
P35462DRD3DB00714Apomorphineapproved, investigationalagonist
P35462DRD3DB00320Dihydroergotamineapproved, investigationalagonist
P35462DRD3DB04946Iloperidoneapprovedantagonist
P35462DRD3DB01235Levodopaapprovedagonist
P35462DRD3DB00268Ropiniroleapproved, investigationalagonist
P35462DRD3DB14185Aripiprazole lauroxilapproved, investigational
P35462DRD3DB00477Chlorpromazineapproved, investigational, vet_approvedinhibitor
P35462DRD3DB01238Aripiprazoleapproved, investigationalantagonist, partial agonist
P35462DRD3DB00589Lisurideapproved, investigationalagonist
P35462DRD3DB01184Domperidoneapproved, investigational, vet_approvedantagonist
P35462DRD3DB09014Captodiameexperimentalagonist
P35462DRD3DB05766Norclozapineinvestigational
P35462DRD3DB00391Sulpirideapproved, investigationalantagonist
P35462DRD3DB01100Pimozideapprovedantagonist
P35462DRD3DB09223Blonanserininvestigationalantagonist
P35462DRD3DB09128Brexpiprazoleapproved, investigationalpartial agonist
P35462DRD3DB00409Remoxiprideapproved, withdrawnantagonist
P35462DRD3DB00875Flupentixolapproved, investigational, withdrawnantagonist
P35462DRD3DB05271Rotigotineapprovedagonist
P35462DRD3DB00502Haloperidolapprovedinverse agonist
P35462DRD3DB06216Asenapineapprovedantagonist
P35462DRD3DB06016Cariprazineapproved, investigationalpartial agonist
P35462DRD3DB00363Clozapineapprovedantagonist
P35462DRD3DB09289Tianeptineinvestigationalagonist
P35462DRD3DB00246Ziprasidoneapprovedantagonist
P35462DRD3DB00408Loxapineapprovedbinder
P35462DRD3DB09207AS-8112experimentalantagonist
P35462DRD3DB00988Dopamineapprovedagonist
P35462DRD3DB01403Methotrimeprazineapproved, investigationalantagonist
P35462DRD3DB06148Mianserinapproved, investigationalbinder
P35462DRD3DB06477Sumaniroleinvestigational
P35462DRD3DB00334Olanzapineapproved, investigationalantagonist
P35462DRD3DB00248Cabergolineapprovedagonist
P35462DRD3DB09286Pipamperoneinvestigational
P35462DRD3DB06454Sarizotaninvestigationalligand
P35462DRD3DB11274Dihydro-alpha-ergocryptineapprovedpartial agonist
P35462DRD3DB01267Paliperidoneapprovedantagonist

Related Diseases to DRD3


check button Previous studies relating to the alternative splicing of DRD3 and disease information from the MeSH term (PubMed)
GenePMIDTitleAbstractMeSH IDMeSH term
DRD39457173Dopamine receptors: from structure to function.The diverse physiological actions of dopamine are mediated by at least five distinct G protein-coupled receptor subtypes. Two D1-like receptor subtypes (D1 and D5) couple to the G protein Gs and activate adenylyl cyclase. The other receptor subtypes belong to the D2-like subfamily (D2, D3, and D4) and are prototypic of G protein-coupled receptors that inhibit adenylyl cyclase and activate K+ channels. The genes for the D1 and D5 receptors are intronless, but pseudogenes of the D5 exist. The D2 and D3 receptors vary in certain tissues and species as a result of alternative splicing, and the human D4 receptor gene exhibits extensive polymorphic variation. In the central nervous system, dopamine receptors are widely expressed because they are involved in the control of locomotion, cognition, emotion, and affect as well as neuroendocrine secretion. In the periphery, dopamine receptors are present more prominently in kidney, vasculature, and pituitary, where they affect mainly sodium homeostasis, vascular tone, and hormone secretion. Numerous genetic linkage analysis studies have failed so far to reveal unequivocal evidence for the involvement of one of these receptors in the etiology of various central nervous system disorders. However, targeted deletion of several of these dopamine receptor genes in mice should provide valuable information about their physiological functions.D006973Hypertension


Clinically important variants in DRD3


check button (ClinVar, 04/20/2024)
accession_iduniprot_idgene_nameTypeVariantClinical_significance