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Center for Computational Systems Medicine
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Protein Summary

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AS Summary

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Protein Functional Features

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Gene Isoform Structures and Expression Levels

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Protein Structures

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pLDDT Score Distribution

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Ramachandran Plot of Protein Structures

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Potential Active Site Information

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Protein Structure and Feature Comparision

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Protein-Protein Interaction

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Related Drugs

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Related Diseases

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Clinically Important Variants

Protein:HSP90AA1

Protein Summary

check button Gene summary
Gene name: HSP90AA1
ASpdb.0 ID: 3320
Gene
Gene symbol

HSP90AA1

Gene ID

3320

Gene nameheat shock protein 90 alpha family class A member 1
SynonymsEL52|HEL-S-65p|HSP86|HSP89A|HSP90A|HSP90N|HSPC1|HSPCA|HSPCAL1|HSPCAL4|HSPN|Hsp103|Hsp89|Hsp90|LAP-2|LAP2
Cytomap

14q32.31

Type of geneprotein-coding
Descriptionheat shock protein HSP 90-alphaHSP 86LPS-associated protein 2epididymis luminal secretory protein 52epididymis secretory sperm binding protein Li 65pheat shock 86 kDaheat shock 90kD protein 1, alphaheat shock 90kD protein 1, alpha-like 4heat shock
Modification date20240407
UniProtAcc

P07900


check button Gene ontology of this gene with evidence of Inferred from Direct Assay (IDA) from Entrez
PartnerGeneGO IDGO termPubMed ID
GeneHSP90AA1

GO:0001934

positive regulation of protein phosphorylation

19363271

GeneHSP90AA1

GO:0002218

activation of innate immune response

20628368

GeneHSP90AA1

GO:0002230

positive regulation of defense response to virus by host

20628368

GeneHSP90AA1

GO:0005524

ATP binding

27353360

GeneHSP90AA1

GO:0005654

nucleoplasm

-

GeneHSP90AA1

GO:0005737

cytoplasm

10791971

GeneHSP90AA1

GO:0005739

mitochondrion

25609812

GeneHSP90AA1

GO:0005829

cytosol

-

GeneHSP90AA1

GO:0007004

telomere maintenance via telomerase

10197982

GeneHSP90AA1

GO:0016887

ATP hydrolysis activity

15937123|29127155

GeneHSP90AA1

GO:0030235

nitric-oxide synthase regulator activity

15937123

GeneHSP90AA1

GO:0030911

TPR domain binding

9660753

GeneHSP90AA1

GO:0031396

regulation of protein ubiquitination

16809764

GeneHSP90AA1

GO:0032273

positive regulation of protein polymerization

19363271

GeneHSP90AA1

GO:0032728

positive regulation of interferon-beta production

20628368

GeneHSP90AA1

GO:0032991

protein-containing complex

23349634

GeneHSP90AA1

GO:0042802

identical protein binding

29127155

GeneHSP90AA1

GO:0042803

protein homodimerization activity

29127155

GeneHSP90AA1

GO:0042981

regulation of apoptotic process

25609812

GeneHSP90AA1

GO:0045040

protein insertion into mitochondrial outer membrane

15644312

GeneHSP90AA1

GO:0051131

chaperone-mediated protein complex assembly

15644312

GeneHSP90AA1

GO:0051973

positive regulation of telomerase activity

10197982

GeneHSP90AA1

GO:0098586

cellular response to virus

25609812

GeneHSP90AA1

GO:1902949

positive regulation of tau-protein kinase activity

19363271

GeneHSP90AA1

GO:1905323

telomerase holoenzyme complex assembly

10197982



AS Summary

check button Information of the canonical protein with experimentally identified structure from PDB (2023).
UniProt AccFile namePDB IDMethodResolutionChainStartEnd
P07900-1P07900-1_3q6m_B.pdb3Q6MX-ray3.0B294699

check button ASpdb's canonical and alternatively spliced isoform information.
accession_idgene_namecanonical_idalternative_idcanonical_lengthalternative_lengthcanonical_startcanonical_endtypeoriginalSEQvariationSEQalternative_startalternative_end
P07900HSP90AA1P07900-1P07900-273285411SubstitutionMMPPCSGGDGSTPPGPSLRDRDCPAQSAEYPRDRLDPRPGSPSEASSPPFLRSRAPVNWYQEKAQVFLWHLMVSGSTTLLCLWKQPFHVSAFPVTASLAFRQSQGAGQHLYKDLQPFILLRLLM1123

check buttonMultiple sequence alignment of our canonical and alternatively spliced HSP90AA1

check button Matched gene isoform IDs with Ensembl and RefSeq of our canonical and alternative spliced genes of HSP90AA1
UniProt-idENSGENSTENSP
P07900-1ENSG00000080824.19ENST00000216281.13ENSP00000216281.8
P07900-2ENSG00000080824.19ENST00000334701.11ENSP00000335153.7

UniProt-idNM IDNP ID
P07900-1NM_005348.3NP_005339.3
P07900-2NM_001017963.2NP_001017963.2

check buttonAmino acid sequences of our canonical and alternatively spliced HSP90AA1
accession_idProtein sequence
P07900-1MPEETQTQDQPMEEEEVETFAFQAEIAQLMSLIINTFYSNKEIFLRELISNSSDALDKIRYESLTDPSKLDSGKELHINLIPNKQDRTLT
IVDTGIGMTKADLINNLGTIAKSGTKAFMEALQAGADISMIGQFGVGFYSAYLVAEKVTVITKHNDDEQYAWESSAGGSFTVRTDTGEPM
GRGTKVILHLKEDQTEYLEERRIKEIVKKHSQFIGYPITLFVEKERDKEVSDDEAEEKEDKEEEKEKEEKESEDKPEIEDVGSDEEEEKK
DGDKKKKKKIKEKYIDQEELNKTKPIWTRNPDDITNEEYGEFYKSLTNDWEDHLAVKHFSVEGQLEFRALLFVPRRAPFDLFENRKKKNN
IKLYVRRVFIMDNCEELIPEYLNFIRGVVDSEDLPLNISREMLQQSKILKVIRKNLVKKCLELFTELAEDKENYKKFYEQFSKNIKLGIH
EDSQNRKKLSELLRYYTSASGDEMVSLKDYCTRMKENQKHIYYITGETKDQVANSAFVERLRKHGLEVIYMIEPIDEYCVQQLKEFEGKT
LVSVTKEGLELPEDEEEKKKQEEKKTKFENLCKIMKDILEKKVEKVVVSNRLVTSPCCIVTSTYGWTANMERIMKAQALRDNSTMGYMAA
KKHLEINPDHSIIETLRQKAEADKNDKSVKDLVILLYETALLSSGFSLEDPQTHANRIYRMIKLGLGIDEDDPTADDTSAAVTEEMPPLE
P07900-2MPPCSGGDGSTPPGPSLRDRDCPAQSAEYPRDRLDPRPGSPSEASSPPFLRSRAPVNWYQEKAQVFLWHLMVSGSTTLLCLWKQPFHVSA
FPVTASLAFRQSQGAGQHLYKDLQPFILLRLLMPEETQTQDQPMEEEEVETFAFQAEIAQLMSLIINTFYSNKEIFLRELISNSSDALDK
IRYESLTDPSKLDSGKELHINLIPNKQDRTLTIVDTGIGMTKADLINNLGTIAKSGTKAFMEALQAGADISMIGQFGVGFYSAYLVAEKV
TVITKHNDDEQYAWESSAGGSFTVRTDTGEPMGRGTKVILHLKEDQTEYLEERRIKEIVKKHSQFIGYPITLFVEKERDKEVSDDEAEEK
EDKEEEKEKEEKESEDKPEIEDVGSDEEEEKKDGDKKKKKKIKEKYIDQEELNKTKPIWTRNPDDITNEEYGEFYKSLTNDWEDHLAVKH
FSVEGQLEFRALLFVPRRAPFDLFENRKKKNNIKLYVRRVFIMDNCEELIPEYLNFIRGVVDSEDLPLNISREMLQQSKILKVIRKNLVK
KCLELFTELAEDKENYKKFYEQFSKNIKLGIHEDSQNRKKLSELLRYYTSASGDEMVSLKDYCTRMKENQKHIYYITGETKDQVANSAFV
ERLRKHGLEVIYMIEPIDEYCVQQLKEFEGKTLVSVTKEGLELPEDEEEKKKQEEKKTKFENLCKIMKDILEKKVEKVVVSNRLVTSPCC
IVTSTYGWTANMERIMKAQALRDNSTMGYMAAKKHLEINPDHSIIETLRQKAEADKNDKSVKDLVILLYETALLSSGFSLEDPQTHANRI

Protein Functional Features

check buttonMain function of this protein. (from UniProt)
HSP90AA1 (go to UniProt):P07900

check buttonRetention analysis result of protein across 39 protein features of UniProt such as six molecule processing features, 13 region features, four site features, six amino acid modification features, two natural variation features, five experimental info features, and 3 secondary structure features. Here, because of limited space for viewing, we only show the protein feature retention information belong to the 13 regional features. All retention annotation result can be downloaded at

download page

* Minus value of BPloci means that the break pointn is located before the CDS.
- Retained protein feature among the 13 regional features.
Accession_idSubsectionStartEndFuncitonal featureSplicing information


Gene Isoform Structures and Expression Levels for HSP90AA1

check buttonGene structures of our canonical and alternative spliced genes of HSP90AA1
* Click on the image to open the UCSC genome browser with custom track showing this image in a new window.
gene isoform structure of HSP90AA1

check button Expression levels of gene isoforms across GTEx.
gtex expression

check button Expression levels of gene isoforms across TCGA.
tcga expression


Protein Structures

check button PDB and CIF files of the predicted protein structures
* Here we show the 3D structure of the proteins using Mol*. AlphaFold produces a per-residue confidence score (pLDDT) between 0 and 100. Model confidence is shown from the pLDDT values per residue. pLDDT corresponds to the model’s prediction of its score on the local Distance Difference Test. It is a measure of local accuracy (from AlphfaFold website). To color code individual residues, we transformed individual PDB files into CIF format.
3D view using mol* of P07900-1
3D view using mol* of P07900-2


pLDDT Score Distribution

check button pLDDT score distribution of the predicted protein structures from AlphaFold2
* AlphaFold produces a per-residue confidence score (pLDDT) between 0 and 100.
pLDDT distribution across the protein length of P07900-1
all structure
pLDDT distribution across the protein length of P07900-2
all structure


Ramachandran Plot of Protein Structures


check button Ramachandran plot of the torsional angles - phi (φ)and psi (ψ) - of the residues (amino acids) contained in this protein peptide.
Ramachandran plot of P07900-1
all structure
Ramachandran plot of P07900-2
all structure

Potential Active Site Information


check button The potential binding sites of these proteins were identified using SiteMap, a module of the Schrodinger suite.
UniProt-idSite scoreSizeD scoreVolumeExposureEnclosureContactPhobicPhilicBalanceDon/AccResidues
P07900-11.1112211.051383.1310.3740.8641.1130.8231.250.6580.60838,47,48,51,52,54,55,58,91,93,95,96,97,98,102,106,
107,109,112,113,114,115,117,118,132,134,135,136,13
7,138,139,150,154,183,184,186,398,400
P07900-21.122211.041381.4160.3320.8781.1590.9121.3050.6990.497169,170,172,173,174,176,177,180,184,213,215,218,21
9,220,224,228,229,234,235,236,237,239,240,253,254,
256,257,258,259,260,261,272,276,306,308,522

Protein Structure and Feature Comparision


check button Protein Structure Comparision Using Template Modeling Scores (TM-score).
all structure

check button Protein Structure Comparision Visualization with mol*. between Canonical predicted structure (AF2)(orange) vs Canonical validated structure (PDB)(green)
3D view using mol* of P07900-1_P07900-1_3q6m_B.pdb

check button Protein Structure Comparision Visualization with mol*. between Canonical validated structure (PDB)(orange) vs Alternative predicted structure (AF2)(green)
3D view using mol* of P07900-1_3q6m_B_P07900-2.pdb

check button Protein Structure Comparision Visualization with mol*. between Canonical predicted structure (AF2)(orange) vs Alternative predicted structure (AF2)(green)
3D view using mol* of P07900-1_P07900-2.pdb

check button Protein Feature Comparison of the protein sequendary structures among the protiens.
./stats/secondary_structure/figure/P07900-1_vs_P07900-2.png
all structure<

check button Protein Feature Comparison of the relative accessible surface area (ASA) among the protiens.
./stats/relative_asa/P07900-1_vs_P07900-2.png
all structure<


Protein-Protein Interaction


check button Interactors from UniProt.
Accession_idSubsectionStartEndFuncitonal featureSplicing information


check button Interactors from STRING.
Gene nameInteractors


Related Drugs to HSP90AA1


check button Drugs targeting this gene/protein.
(DrugBank)
UniProt accessionGene nameDrugBank IDDrug nameDrug groupActions
P07900HSP90AA1DB069574-CHLORO-6-(4-{4-[4-(METHYLSULFONYL)BENZYL]PIPERAZIN-1-YL}-1H-PYRAZOL-5-YL)BENZENE-1,3-DIOLexperimental
P07900HSP90AA1DB07317(3E)-3-[(phenylamino)methylidene]dihydrofuran-2(3H)-oneexperimental
P07900HSP90AA1DB073196-(3-BROMO-2-NAPHTHYL)-1,3,5-TRIAZINE-2,4-DIAMINEexperimental
P07900HSP90AA1DB00615Rifabutinapproved, investigationalother/unknown
P07900HSP90AA1DB069585-(5-CHLORO-2,4-DIHYDROXYPHENYL)-N-ETHYL-4-PIPERAZIN-1-YL-1H-PYRAZOLE-3-CARBOXAMIDEexperimental
P07900HSP90AA1DB075024-bromo-6-(6-hydroxy-1,2-benzisoxazol-3-yl)benzene-1,3-diolexperimental
P07900HSP90AA1DB042548-Benzo[1,3]Dioxol-,5-Ylmethyl-9-Butyl-2-Fluoro-9h-Purin-6-Ylamineexperimental
P07900HSP90AA1DB030938-(2,5-Dimethoxy-Benzyl)-2-Fluoro-9h-Purin-6-Ylamineexperimental
P07900HSP90AA1DB025508-(2-Chloro-3,4,5-Trimethoxy-Benzyl)-2-Fluoro-9-Pent-4-Ylnyl-9h-Purin-6-Ylamineexperimental
P07900HSP90AA1DB08197(5E,7S)-2-amino-7-(4-fluoro-2-pyridin-3-ylphenyl)-4-methyl-7,8-dihydroquinazolin-5(6H)-one oximeexperimental
P07900HSP90AA1DB06956N-(4-ACETYLPHENYL)-5-(5-CHLORO-2,4-DIHYDROXYPHENYL)-1H-PYRAZOLE-4-CARBOXAMIDEexperimental
P07900HSP90AA1DB027549-Butyl-8-(3,4,5-Trimethoxybenzyl)-9h-Purin-6-Amineexperimental
P07900HSP90AA1DB076014-chloro-6-{5-[(2-morpholin-4-ylethyl)amino]-1,2-benzisoxazol-3-yl}benzene-1,3-diolexperimental
P07900HSP90AA1DB084424-{[(2R)-2-(2-methylphenyl)pyrrolidin-1-yl]carbonyl}benzene-1,3-diolexperimental
P07900HSP90AA1DB023599-Butyl-8-(2,5-Dimethoxy-Benzyl)-9h-Purin-6-Ylamineexperimental
P07900HSP90AA1DB084368-BENZO[1,3]DIOXOL-,5-YLMETHYL-9-BUTYL-9H-experimental
P07900HSP90AA1DB069615-(5-chloro-2,4-dihydroxyphenyl)-N-ethyl-4-[4-(morpholin-4-ylmethyl)phenyl]isoxazole-3-carboxamideexperimental
P07900HSP90AA1DB081944-methyl-7,8-dihydro-5H-thiopyrano[4,3-d]pyrimidin-2-amineexperimental
P07900HSP90AA1DB074955-(5-CHLORO-2,4-DIHYDROXYPHENYL)-N-ETHYL-4-(4-METHOXYPHENYL)-1H-PYRAZOLE-3-CARBOXAMIDEexperimental
P07900HSP90AA1DB028404-(1,3-Benzodioxol-5-Yl)-5-(5-Ethyl-2,4-Dihydroxyphenyl)-2h-Pyrazole-3-Carboxylic Acidexperimental
P07900HSP90AA1DB04588N-[4-(AMINOSULFONYL)BENZYL]-5-(5-CHLORO-2,4-DIHYDROXYPHENYL)-1H-PYRAZOLE-4-CARBOXAMIDEexperimental
P07900HSP90AA1DB069692-amino-4-[2,4-dichloro-5-(2-pyrrolidin-1-ylethoxy)phenyl]-N-ethylthieno[2,3-d]pyrimidine-6-carboxamideexperimental
P07900HSP90AA1DB02424Geldanamycinexperimental, investigational
P07900HSP90AA1DB031378-(2,5-Dimethoxy-Benzyl)-2-Fluoro-9-Pent-9h-Purin-6-Ylamineexperimental
P07900HSP90AA1DB069645-(5-CHLORO-2,4-DIHYDROXYPHENYL)-N-ETHYL-4-(4-METHOXYPHENYL)ISOXAZOLE-3-CARBOXAMIDEexperimental
P07900HSP90AA1DB045058-(2-Chloro-3,4,5-Trimethoxy-Benzyl)-9-Pent-4-Ylnyl-9h-Purin-6-Ylamineexperimental
P07900HSP90AA1DB084432-(1H-pyrrol-1-ylcarbonyl)benzene-1,3,5-triolexperimental
P07900HSP90AA1DB07594CCT-018159experimental
P07900HSP90AA1DB087892-AMINO-4-(2,4-DICHLOROPHENYL)-N-ETHYLTHIENO[2,3-D]PYRIMIDINE-6-CARBOXAMIDEexperimental
P07900HSP90AA1DB078778-(6-BROMO-BENZO[1,3]DIOXOL-5-YLSULFANYL)-9-(3-ISOPROPYLAMINO-PROPYL)-ADENINEexperimental
P07900HSP90AA1DB09130Copperapproved, investigational
P07900HSP90AA1DB07325N-[(2-AMINO-6-METHYLPYRIMIDIN-4-YL)METHYL]-3-{[(E)-(2-OXODIHYDROFURAN-3(2H)-YLIDENE)METHYL]AMINO}BENZENESULFONAMIDEexperimental
P07900HSP90AA1DB12442Alvespimycininvestigationalinhibitor
P07900HSP90AA1DB085572-[(2-methoxyethyl)amino]-4-(4-oxo-1,2,3,4-tetrahydro-9H-carbazol-9-yl)benzamideexperimental
P07900HSP90AA1DB035049-Butyl-8-(2-Chloro-3,4,5-Trimethoxy-Benzyl)-9h-Purin-6-Ylamineexperimental
P07900HSP90AA1DB06070SNX-5422investigational
P07900HSP90AA1DB071004-CHLORO-6-(4-PIPERAZIN-1-YL-1H-PYRAZOL-5-YL)BENZENE-1,3-DIOLexperimental
P07900HSP90AA1DB00716Nedocromilapproved, investigational
P07900HSP90AA1DB038999-Butyl-8-(4-Methoxybenzyl)-9h-Purin-6-Amineexperimental
P07900HSP90AA1DB038099-Butyl-8-(3-Methoxybenzyl)-9h-Purin-6-Amineexperimental
P07900HSP90AA1DB087883,6-DIAMINO-5-CYANO-4-(4-ETHOXYPHENYL)THIENO[2,3-B]PYRIDINE-2-CARBOXAMIDEexperimental
P07900HSP90AA1DB037494-(1h-Imidazol-4-Yl)-3-(5-Ethyl-2,4-Dihydroxy-Phenyl)-1h-Pyrazoleexperimental
P07900HSP90AA1DB087874-(2,4-dichlorophenyl)-5-phenyldiazenyl-pyrimidin-2-amineexperimental
P07900HSP90AA1DB087864-(2-methoxyethoxy)-6-methylpyrimidin-2-amineexperimental
P07900HSP90AA1DB09221Polaprezincexperimentalagonist
P07900HSP90AA1DB04216Quercetinexperimental, investigational
P07900HSP90AA1DB073243-({2-[(2-AMINO-6-METHYLPYRIMIDIN-4-YL)ETHYNYL]BENZYL}AMINO)-1,3-OXAZOL-2(3H)-ONEexperimental
P07900HSP90AA1DB040549-Butyl-8-(2,5-Dimethoxy-Benzyl)-2-Fluoro-9h-Purin-6-Ylamineexperimental
P07900HSP90AA1DB05134Tanespimycininvestigational

Related Diseases to HSP90AA1


check button Previous studies relating to the alternative splicing of HSP90AA1 and disease information from the MeSH term (PubMed)
GenePMIDTitleAbstractMeSH IDMeSH term
HSP90AA125024377The differential regulation of human ACT1 isoforms by Hsp90 in IL-17 signaling.IL-17 is a proinflammatory cytokine implicated in the pathogenesis of autoimmune diseases including psoriasis. ACT1 is an essential adaptor molecule in the IL-17 signaling pathway. A missense single nucleotide polymorphism (rs33980500; SNP-D10N) that resulted in the substitution of an asparagine for an aspartic acid at position 10 of ACT1 (ACT1-D10N) is associated with psoriasis susceptibility. Due to alternative splicing in humans, SNP-D10N encodes two mutated ACT1 proteins, ACT1-D10N and ACT1-D19N. Although both ACT1 isoforms are Hsp90 client proteins, the nine additional amino acids in ACT1-D19N provide an additional Hsp90 binding site that is absent in ACT1-D10N. Therefore, whereas ACT1-D10N is a dead protein that is unable to transduce IL-17 signals for gene expression, ACT1-D19N is fully responsive to IL-17. Intriguingly, the two ACT1 isoforms are differentially expressed in ACT1(D10N/D10N) fibroblasts and T cells. Fibroblasts express both isoforms equally, enabling ACT1-D19N to compensate for the loss of ACT1-D10N function. ACT1(D10N/D10N) T cells, however, express predominantly ACT1-D10N. Lacking this compensatory mechanism, ACT1(D10N/D10N) T cells behave like ACT1-deficient T cells, exhibiting a dysregulated and hyperactive Th17 phenotype with overproduction of IL-22 and IL-17. The hyperactive Th17 response combined with fully responsive fibroblasts likely synergized to contribute to psoriasis susceptibility in SNP-D10N patients.D020022Genetic Predisposition to Disease
HSP90AA125024377The differential regulation of human ACT1 isoforms by Hsp90 in IL-17 signaling.IL-17 is a proinflammatory cytokine implicated in the pathogenesis of autoimmune diseases including psoriasis. ACT1 is an essential adaptor molecule in the IL-17 signaling pathway. A missense single nucleotide polymorphism (rs33980500; SNP-D10N) that resulted in the substitution of an asparagine for an aspartic acid at position 10 of ACT1 (ACT1-D10N) is associated with psoriasis susceptibility. Due to alternative splicing in humans, SNP-D10N encodes two mutated ACT1 proteins, ACT1-D10N and ACT1-D19N. Although both ACT1 isoforms are Hsp90 client proteins, the nine additional amino acids in ACT1-D19N provide an additional Hsp90 binding site that is absent in ACT1-D10N. Therefore, whereas ACT1-D10N is a dead protein that is unable to transduce IL-17 signals for gene expression, ACT1-D19N is fully responsive to IL-17. Intriguingly, the two ACT1 isoforms are differentially expressed in ACT1(D10N/D10N) fibroblasts and T cells. Fibroblasts express both isoforms equally, enabling ACT1-D19N to compensate for the loss of ACT1-D10N function. ACT1(D10N/D10N) T cells, however, express predominantly ACT1-D10N. Lacking this compensatory mechanism, ACT1(D10N/D10N) T cells behave like ACT1-deficient T cells, exhibiting a dysregulated and hyperactive Th17 phenotype with overproduction of IL-22 and IL-17. The hyperactive Th17 response combined with fully responsive fibroblasts likely synergized to contribute to psoriasis susceptibility in SNP-D10N patients.D011565Psoriasis


Clinically important variants in HSP90AA1


check button (ClinVar, 04/20/2024)
accession_iduniprot_idgene_nameTypeVariantClinical_significance